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AfCS Yeast 2-Hybrid Interaction Data

Identification of protein-protein interactions and the changes in such interactions that result from ligand binding or covalent modification are clearly central to understanding the mechanisms of signal transduction and establishing intracellular signaling networks. The AfCS is utilizing high-throughput methods to detect protein-protein interactions between signaling molecules expressed in B cells and cardiac myocytes. The AfCS has arranged a collaboration with Myriad Genetics to perform large-scale yeast two-hybrid screens.

The yeast two-hybrid system is a well-established methodology that permits the rapid identification of binary interactions between a chosen test protein (the "bait") and an interacting protein (the "prey"). This is achieved by expressing the bait protein as a hybrid, fused to the DNA binding domain of a transcription factor, and screening it against a library of prey candidates that are fused to the corresponding transcriptional activation domain. Both fusions are expressed in yeast cells that carry a reporter gene whose expression is under the control of the transcription factor, such that the interaction of the "two hybrids" leads to expression of the reporter.

The AfCS System Committees selected B cell and myocyte signaling proteins that were considered optimal candidates for yeast two-hybrid screens. Myriad has developed an industrial-scale system, termed ProNet®, for the discovery of protein-protein interactions via the yeast two-hybrid system. An efficient mating protocol, which uses proprietary strains and vectors, was used to search AfCS-selected baits against different AfCS activation domain libraries.

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