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Protein A001842
Author-entered Data
V1.0, Peer Reviewed
Published 16 Feb 2005
Automated Data
Not Reviewed
As At Publication
Automated Data
Not Reviewed
Latest from 7 Sep 2010

Plasma membrane calcium transporting ATPase isoform 2

Version 1.0, Peer Reviewed And Published 16 Feb 2005
Domains and Motifs retrieved 27 Jan 2005

doi:10.1038/mp.a001842.01  How to cite this Molecule Page

Quick Links
Matching InterPro Records
Matching Pfam / SMART Records
Matching PRINTS Records
 
Domain Map
ATPase, E1-E2 type PRINTS: P-type cation-transporting ATPase superfamily signature 237-252: P-type cation-transporting ATPase superfamily signature 452-467: P-type cation-transporting ATPase superfamily signature 656-668: P-type cation-transporting ATPase superfamily signature 678-689: P-type cation-transporting ATPase superfamily signature 773-793: P-type cation-transporting ATPase superfamily signature 797-810: P-type cation-transporting ATPase superfamily signature Cation transporting ATPase PRINTS: Sodium/potassium-transporting ATPase signature 445-467: Sodium/potassium-transporting ATPase signature 577-596: Sodium/potassium-transporting ATPase signature Cation transporting ATPase, C-terminal Pfam: Cation transporting ATPase, C-terminus 892-1043: Cation transporting ATPase, C-terminus Cation transporting ATPase, N-terminal Pfam: Cation transporter/ATPase, N-terminus 41-124: Cation transporter/ATPase, N-terminus Haloacid dehalogenase-like hydrolase Pfam: haloacid dehalogenase-like hydrolase 448-796: haloacid dehalogenase-like hydrolase E1-E2 ATPase-associated region Pfam: E1-E2 ATPase 156-444: E1-E2 ATPase
 
Family References without Computational Evidence
Database IDInterpro symbolInterpro Name
IPR006408ATPase-IIB_CaCalcium-translocating P-type ATPase, PMCA-type
 
Other Representations
NCBI Conserved Domain Summary
InterPro detailed matches for identical protein(s): Q9R0K7  
Pfam domain map for identical protein(s): Q9R0K7  
 
Matching InterPro Records
Database IDIPR006069 (Cation_ATPase)
NameCation transporting ATPase
Abstract

The alpha chains of sodium/potassium-transporting ATPases (H+/K+ and Na+/K+-ATPase) catalyze the hydrolysis of ATP, coupled with the exchange of sodium and potassium ions across the plasma membrane. The proteins are located in the cell membrane , the ion transport they mediate creating the electro-chemical gradient that provides the energy for the active transport of various nutrients. H+/K+-transporting ATPases are also responsible for production of acid in the stomach . H+/K+ and Na+/K+-ATPase are members of the P-type (or E1-E2-type) cation-transporting ATPase superfamily, which has evolved from a common ancestral gene . The sequences contain 10 transmembrane (TM) helices, some of which are well conserved throughout the superfamily. They may thus all operate via a similar mechanism, with an aspartylphosphoryl enzyme intermediate being formed during the catalytic cycle.

Referenced By Molecule Page ProteinYes
Interpro TypeFamily
Gene OntologyGO:0016020, membrane, Cellular Component
GO:0015662, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, Molecular Function
GO:0006812, cation transport, Biological Process
Signatures & Links3.6.3.9 (EC)
PR00121 (PRINTS), NAKATPASE, num proteins = 278
Structure References-
 
Database IDIPR004014 (Cation_ATPase_N)
NameCation transporting ATPase, N-terminal
Abstract

The alpha chains of sodium/potassium-transporting ATPases (H+/K+ and Na+/K+-ATPase) catalyze the hydrolysis of ATP, coupled with the exchange of sodium and potassium ions across the plasma membrane. The proteins are located in the cell membrane , the ion transport they mediate creating the electro-chemical gradient that provides the energy for the active transport of various nutrients. H+/K+-transporting ATPases are also responsible for production of acid in the stomach . H+/K+ and Na+/K+-ATPase are members of the P-type (or E1-E2-type) cation-transporting ATPase superfamily, which has evolved from a common ancestral gene . The sequences contain 10 transmembrane (TM) helices, some of which are well conserved throughout the superfamily. They may thus all operate via a similar mechanism, with an aspartylphosphoryl enzyme intermediate being formed during the catalytic cycle. Members of these families are involved in Na+/K+, H+/K+, Ca2+ and Mg2+- transport.

Referenced By Molecule Page ProteinYes
Interpro TypeDomain
Gene OntologyGO:0016020, membrane, Cellular Component
GO:0015662, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, Molecular Function
GO:0006812, cation transport, Biological Process
Signatures & Links3.6.3 (EC)
PF00690 (PANDIT)
PF00690 (PFAM), Cation_ATPase_N, num proteins = 707
Structure References
f.33.1.1 (SCOP)1iwo (PDB)
 
Database IDIPR008250 (E1-E2_ATPase_reg)
NameE1-E2 ATPase-associated region
Abstract

P-type (or E1-E2-type) ATPases constitute a superfamily of cation transport enzymes, present both in prokaryota and eukaryota, whose members mediate membrane flux of all common biologically relevant cations . The enzymes, that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups : (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the Mg2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification.

Referenced By Molecule Page ProteinYes
Interpro TypeDomain
Gene OntologyGO:0016020, membrane, Cellular Component
GO:0016820, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, Molecular Function
GO:0005524, ATP binding, Molecular Function
Signatures & Links3.6.3 (EC)
PF00122 (PANDIT)
PF00122 (PFAM), E1-E2_ATPase, num proteins = 1559
Structure References
b.82.7.1 (SCOP)f.33.1.1 (SCOP)1iwo (PDB)
 
Database IDIPR001757 (ATPase_E1-E2)
NameATPase, E1-E2 type
Abstract

P-type (or E1-E2-type) ATPases constitute a superfamily of cation transport enzymes, present both in prokaryota and eukaryota, whose members mediate membrane flux of all common biologically relevant cations . The enzymes, that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups : (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the Mg2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. According to PRINTS signatures, P-type ATPase superfamily is divided into six groups (each of them has its own IPR number). And the entries of these groups can match the previous classification in the following way: IPR006069 fits group 2; IPR000695 fits group 3; IPR001366, IPR001756 and IPR001877 fit group 4. Graduation into four major groups is more biologically relevant, as it correlates with cation specificities and biological sources of P-type ATPase.

Referenced By Molecule Page ProteinYes
Interpro TypeFamily
Gene OntologyGO:0016020, membrane, Cellular Component
GO:0005524, ATP binding, Molecular Function
GO:0015662, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, Molecular Function
GO:0006812, cation transport, Biological Process
Signatures & LinksIPB001757 (BLOCKS)
PS00154 (MSDsite)
PR00119 (PRINTS), CATATPASE, num proteins = 1630
PS00154 (PROSITE), ATPASE_E1_E2, num proteins = 1673
PDOC00139 (PROSITEDOC)
TIGR01494 (TIGRFAMs), ATPase_P-type, num proteins = 1728
Structure References
b.82.7.1 (SCOP)c.108.1.7 (SCOP)d.220.1.1 (SCOP)f.33.1.1 (SCOP)
1iwo (PDB)
 
Database IDIPR006068 (Cation_ATPase_C)
NameCation transporting ATPase, C-terminal
Abstract

Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport.

Referenced By Molecule Page ProteinYes
Interpro TypeDomain
Gene OntologyGO:0016020, membrane, Cellular Component
GO:0015662, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, Molecular Function
GO:0006812, cation transport, Biological Process
Signatures & LinksPF00689 (PANDIT)
PF00689 (PFAM), Cation_ATPase_C, num proteins = 533
Structure References
f.33.1.1 (SCOP)1iwo (PDB)
 
Database IDIPR005834 (Dehal_like_hydro)
NameHaloacid dehalogenase-like hydrolase
Abstract

This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.

Referenced By Molecule Page ProteinYes
Interpro TypeDomain
Gene OntologyGO:0003824, catalytic activity, Molecular Function
GO:0008152, metabolism, Biological Process
Signatures & Links3 (EC)
PF00702 (PANDIT)
PF00702 (PFAM), Hydrolase, num proteins = 3980
Structure References
c.108.1 (SCOP)1.10.164.10.1 (CATH)1.10.164.20.1 (CATH)3.40.50.1000 (CATH)
1aq6 (PDB)1cqz (PDB)1cr6 (PDB)1ek1 (PDB)
1ek2 (PDB)1f5s (PDB)1fez (PDB)1iwo (PDB)
1j97 (PDB)1jud (PDB)1k1e (PDB)1l7m (PDB)
1l7n (PDB)1l7o (PDB)1l7p (PDB)1lvh (PDB)
1qh9 (PDB)1qq5 (PDB)1qq6 (PDB)1qq7 (PDB)
1zrm (PDB)1zrn (PDB)
 
Database IDIPR006408 (ATPase-IIB_Ca)
NameCalcium-translocating P-type ATPase, PMCA-type
Abstract

This family describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes . In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects . The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump .

Referenced By Molecule Page ProteinYes
Interpro TypeFamily
Gene OntologyGO:0016020, membrane, Cellular Component
GO:0005509, calcium ion binding, Molecular Function
GO:0005388, calcium-transporting ATPase activity, Molecular Function
GO:0005524, ATP binding, Molecular Function
GO:0015085, calcium ion transporter activity, Molecular Function
GO:0006816, calcium ion transport, Biological Process
Signatures & Links3.6.3.8 (EC)
TIGR01517 (TIGRFAMs), ATPase-IIB_Ca, num proteins = 103
Structure References-
 
Matching Pfam / SMART Records
PFam (hmmpfam) Output
Database IDPF00122 (E1-E2_ATPase)
DescriptionE1-E2 ATPase
Score135.7
E Value1.10E-37
Num Matches1
Referenced By Molecule Page ProteinYes
Match NumSequence CoordsModel CoordsScoreE Value
1156-4441-245135.71.10E-37

Database IDPF00689 (Cation_ATPase_C)
DescriptionCation transporting ATPase, C-terminus
Score113.7
E Value4.40E-31
Num Matches1
Referenced By Molecule Page ProteinYes
Match NumSequence CoordsModel CoordsScoreE Value
1892-10431-199113.74.40E-31

Database IDPF00690 (Cation_ATPase_N)
DescriptionCation transporter/ATPase, N-terminus
Score74.9
E Value2.20E-19
Num Matches1
Referenced By Molecule Page ProteinYes
Match NumSequence CoordsModel CoordsScoreE Value
141-1241-8774.92.20E-19

Database IDPF00702 (Hydrolase)
Descriptionhaloacid dehalogenase-like hydrolase
Score57.8
E Value3.10E-14
Num Matches1
Referenced By Molecule Page ProteinYes
Match NumSequence CoordsModel CoordsScoreE Value
1448-7961-18357.83.10E-14

 
Matching PRINTS Records
Prints (fpscan) Output
Database IDPR00119 (CATATPASE)
DescriptionP-type cation-transporting ATPase superfamily signature
PP Value6.60E-45
E Value5.30E-40
Num Matches6/6
Referenced By Molecule Page ProteinYes
Significant MatchYes
Motif NumSequence CoordsPF ScoreP ValueMotif LengthMotif Sequence
1237-251402.03.46E-715DESSLTGESDQVRKS
2452-466644.08.35E-1015CSDKTGTLTTNRMTV
3656-667233.09.39E-412CVVGIEDPVRPE
4678-688384.02.13E-611AGITVRMVTGD
5773-792821.02.29E-1320TGDGTNDGPALKKADVGFAM
6797-809402.05.04E-813TDVAKEASDIILT

Database IDPR00121 (NAKATPASE)
DescriptionSodium/potassium-transporting ATPase signature
PP Value1.90E-16
E Value1.50E-11
Num Matches2/9
Referenced By Molecule Page ProteinYes
Significant MatchYes
Motif NumSequence CoordsPF ScoreP ValueMotif LengthMotif Sequence
4445-466868.02.81E-1222MGNATAICSDKTGTLTTNRMTV
5577-595378.06.60E-519MYSKGASEIVLKKCCKILS


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