The Research Library categorizes, and provides access to, all recent signaling-related research published in the Nature Publishing Group journals. The selection is deliberately broad to facilitate access to all research impacting on the signaling community. Both primary research and review articles are included, as are 'News and Views' articles.
Click here for free access to the 'Featured Articles' section, with new articles every week.
letter Facioscapulohumeral muscular dystrophy in mice overexpressing FRG1
Davide Gabellini, Giuseppe D'Antona, Maurizio Moggio, Alessandro Prelle, Chiara Zecca, Raffaella Adami, Barbara Angeletti, Patrizia Ciscato, Maria Antonietta Pellegrino, Roberto Bottinelli, Michael R. Green and Rossella Tupler Nature439, 973–977
(23 February 2006); doi:10.1038/nature04422
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letter NMDA receptors mediate calcium accumulation in myelin during chemical ischaemia
I. Micu, Q. Jiang, E. Coderre, A. Ridsdale, L. Zhang, J. Woulfe, X. Yin, B. D. Trapp, J. E. McRory, R. Rehak, G. W. Zamponi, W. Wang and P. K. Stys Nature439, 988–992
(23 February 2006); doi:10.1038/nature04474
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letter Purification and unique properties of mammary epithelial stem cells
John Stingl, Peter Eirew, Ian Ricketson, Mark Shackleton, François Vaillant, David Choi, Haiyan I. Li and Connie J. Eaves Nature439, 993–997
(23 February 2006); doi:10.1038/nature04496
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letter Eisosomes mark static sites of endocytosis
Tobias C. Walther, Jason H. Brickner, Pablo S. Aguilar, Sebastián Bernales, Carlos Pantoja and Peter Walter Nature439, 998–1003
(23 February 2006); doi:10.1038/nature04472
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letter A var gene promoter controls allelic exclusion of virulence genes in Plasmodium falciparum malaria
Till S. Voss, Julie Healer, Allison J. Marty, Michael F. Duffy, Jennifer K. Thompson, James G. Beeson, John C. Reeder, Brendan S. Crabb and Alan F. Cowman Nature439, 1004–1008
(23 February 2006); doi:10.1038/nature04407
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letter Identification of pathways regulating cell size and cell-cycle progression by RNAi
Mikael Björklund, Minna Taipale, Markku Varjosalo, Juha Saharinen, Juhani Lahdenperä and Jussi Taipale Nature439, 1009–1013
(23 February 2006); doi:10.1038/nature04469
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article V-ATPase interacts with ARNO and Arf6 in early endosomes and regulates the protein degradative pathway
Andrés Hurtado-Lorenzo, Mhairi Skinner, Jaafar El Annan, Masamitsu Futai, Ge-Hong Sun-Wada, Sylvain Bourgoin, James Casanova, Alan Wildeman, Shaliha Bechoua, Dennis A. Ausiello, Dennis Brown and Vladimir Marshansky Nature Cell Biology8, 124–136
(February 2006); doi:10.1038/ncb1348
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news and views V-ATPase: a potential pH sensor
Chiara Recchi and Philippe Chavrier Nature Cell Biology8, 107–109
(February 2006); doi:10.1038/ncb0206-107
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review article MAPKAP kinases — MKs — two's company, three's a crowd
Matthias Gaestel Nature Reviews Molecular Cell Biology AOP published online 18 January 2006; doi:10.1038/nrm1834
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article Association of β-arrestin and TRAF6 negatively regulates Toll-like receptor-interleukin 1 receptor signaling
Yaya Wang, Yawei Tang, Lin Teng, Yalan Wu, Xiaohui Zhao and Gang Pei Nature Immunology7, 139–147
(February 2006); doi:10.1038/ni1294
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article Ablation of CD22 in ligand-deficient mice restores B cell receptor signaling
Brian E Collins, Brian A Smith, Per Bengtson and James C Paulson Nature Immunology7, 199–206
(February 2006); doi:10.1038/ni1283
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article Intrinsic inhibition of transcription factor E2A by HLH proteins ABF-1 and Id2 mediates reprogramming of neoplastic B cells in Hodgkin lymphoma
Stephan Mathas, Martin Janz, Franziska Hummel, Michael Hummel, Brigitte Wollert-Wulf, Simone Lusatis, Ioannis Anagnostopoulos, Andreas Lietz, Mikael Sigvardsson, Franziska Jundt, Korinna Jöhrens, Kurt Bommert, Harald Stein and Bernd Dörken Nature Immunology7, 207–215
(February 2006); doi:10.1038/ni1285
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letter Prostaglandin E2 EP1 receptors: downstream effectors of COX-2 neurotoxicity
Takayuki Kawano, Josef Anrather, Ping Zhou, Laibaik Park, Gang Wang, Kelly A Frys, Alexander Kunz, Sunghee Cho, Marcello Orio and Costantino Iadecola Nature Medicine12, 225–229
(February 2006); doi:10.1038/nm1362
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review article Mapping normal and cancer cell signalling networks: towards single-cell proteomics
Jonathan M. Irish, Nikesh Kotecha and Garry P. Nolan
Flow cytometry can be used to map signalling networks in individual cancer cells. This form of 'single-cell proteomics' can reveal important new information about the pathways that are activated in therapy-resistant cells and provide biomarkers for use in diagnosis and determining prognosis. Nature Reviews Cancer6, 146–155
(February 2006); doi:10.1038/nrc1804
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letter Induction, suppression and requirement of RNA silencing pathways in virulent Agrobacterium tumefaciens infections
Patrice Dunoyer, Christophe Himber and Olivier Voinnet Nature Genetics38, 258–263
(February 2006); doi:10.1038/ng1722
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news and views Defense and counterdefense in the plant world
Peter M Waterhouse Nature Genetics38, 138–139
(February 2006); doi:10.1038/ng0206-138
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article Retinoic acid receptor β2 promotes functional regeneration of sensory axons in the spinal cord
Liang-Fong Wong, Ping K Yip, Anna Battaglia, John Grist, Jonathan Corcoran, Malcolm Maden, Mimoun Azzouz, Susan M Kingsman, Alan J Kingsman, Nicholas D Mazarakis and Stephen B McMahon Nature Neuroscience9, 243–250
(February 2006); doi:10.1038/nn1622
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review article Paradigm shift in neuroprotection by NMDA receptor blockade: Memantine and beyond
Stuart A. Lipton Nature Reviews Drug Discovery5, 160–170
(February 2006); doi:10.1038/nrd1958
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article Bex1, a novel interactor of the p75 neurotrophin receptor, links neurotrophin signaling to the cell cycle
Marçal Vilar, Maribel Murillo-Carretero, Helena Mira, Kalle Magnusson, Valerie Besset and Carlos F Ibáñez The EMBO Journal advance online publication;
(23 February 2006); doi:10.10.1038/sj.emboj.7601017
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article Histone demethylation by a family of JmjC domain-containing proteins
Yu-ichi Tsukada, Jia Fang, Hediye Erdjument-Bromage, Maria E. Warren, Christoph H. Borchers, Paul Tempst and Yi Zhang Nature439, 811–816
(16 February 2006); doi:10.1038/nature04433
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letter The Polycomb group protein EZH2 directly controls DNA methylation
Emmanuelle Viré, Carmen Brenner, Rachel Deplus, Loïc Blanchon, Mario Fraga, Céline Didelot, Lluis Morey, Aleyde Van Eynde, David Bernard, Jean-Marie Vanderwinden, Mathieu Bollen, Manel Esteller, Luciano Di Croce, Yvan de Launoit and François Fuks Nature439, 871–874
(16 February 2006); doi:10.1038/nature04431
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news and views Developmental biology: Two paths to silence merge
Panthea Taghavi and Maarten van Lohuizen Nature439, 794–795
(16 February 2006); doi:10.1038/439794a
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letter A lever-arm rotation drives motility of the minus-end-directed kinesin Ncd
Nicholas F. Endres, Craig Yoshioka, Ronald A. Milligan and Ronald D. Vale Nature439, 875–878
(16 February 2006); doi:10.1038/nature04320
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letter Crystal structures of catalytic complexes of the oxidative DNA/RNA repair enzyme AlkB
Bomina Yu, William C. Edstrom, Jordi Benach, Yoshitomo Hamuro, Patricia C. Weber, Brian R. Gibney and John F. Hunt Nature439, 879–884
(16 February 2006); doi:10.1038/nature04561
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article Proteome survey reveals modularity of the yeast cell machinery
Anne-Claude Gavin, Patrick Aloy, Paola Grandi, Roland Krause, Markus Boesche, Martina Marzioch, Christina Rau1, Lars Juhl Jensen, Sonja Bastuck, Birgit Dümpelfeld, Angela Edelmann, Marie-Anne Heurtier, Verena Hoffman, Christian Hoefert, Karin Klein, Manuela Hudak, Anne-Marie Michon, Malgorzata Schelder, Markus Schirle, Marita Remor, Tatjana Rudi, Sean Hooper, Andreas Bauer, Tewis Bouwmeester, Georg Casari, Gerard Drewes, Gitte Neubauer, Jens M. Rick, Bernhard Kuster, Peer Bork, Robert B. Russell and Giulio Superti-Furga NatureAdvance online publication
(22 January 2006); doi:10.1038/nature04561
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letter Complex formation of Plk1 and INCENP required for metaphase-anaphase transition
Hidemasa Goto, Tohru Kiyono, Yasuko Tomono, Aie Kawajiri, Takeshi Urano, Koichi Furukawa, Erich A. Nigg and Masaki Inagaki Nature Cell Biology8, 180–187
(February 2006); doi:10.1038/ncb1350
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news and views INCENP at the kinase crossroads
Mar Carmena and William C. Earnshaw Nature Cell Biology8, 110–111
(February 2006); doi:10.1038/ncb0206-110
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article Control of human immunodeficiency virus replication by cytotoxic T lymphocytes targeting subdominant epitopes
Nicole Frahm, Photini Kiepiela, Sharon Adams, Caitlyn H Linde, Hannah S Hewitt, Kaori Sango, Margaret E Feeney, Marylyn M Addo, Mathias Lichterfeld, Matthew P Lahaie, Eunice Pae, Alysse G Wurcel, Timothy Roach, M Anne St John, Marcus Altfeld, Francesco M Marincola, Corey Moore, Simon Mallal, Mary Carrington, David Heckerman, Todd M Allen, James I Mullins, Bette T Korber, Philip J R Goulder, Bruce D Walker and Christian Brander Nature Immunology7, 173–178
(February 2006); doi:10.1038/ni1281
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article Conflicting selective forces affect T cell receptor contacts in an immunodominant human immunodeficiency virus epitope
Astrid K N Iversen, Guillaume Stewart-Jones, Gerald H Learn, Natasha Christie, Christina Sylvester-Hviid, Andrew E Armitage, Rupert Kaul, Tara Beattie, Jean K Lee, Yanping Li, Pojchong Chotiyarnwong, Tao Dong, Xiaoning Xu, Mark A Luscher, Kelly MacDonald, Henrik Ullum, Bente Klarlund-Pedersen, Peter Skinhøj, Lars Fugger, Søren Buus, James I Mullins, E Yvonne Jones, P Anton van der Merwe and Andrew J McMichael Nature Immunology7, 179–189
(February 2006); doi:10.1038/ni1298
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news and views Crosscurrents in HIV-1 evolution
Joel N Blankson, Justin R Bailey and Robert F Siliciano Nature Immunology7, 121–122
(February 2006); doi:10.1038/ni0206-121
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review article Pathogen-endoplasmic-reticulum interactions: in through the out door
Craig R. Roy, Suzana P. Salcedo and Jean-Pierre E. Gorvel Nature Reviews Immunology6, 136–147
(February 2006); doi:10.1038/nri1775
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letter Quantitative imaging of Plasmodium transmission from mosquito to mammal
Rogerio Amino, Sabine Thiberge, Béatrice Martin, Susanna Celli, Spencer Shorte, Friedrich Frischknecht and Robert Ménard Nature Medicine12, 220–224
(February 2006); doi:10.1038/nm1350
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news and views Malaria parasites up close
Malcolm K Jones and Michael F Good Nature Medicine12, 170–171
(February 2006); doi:10.1038/nm0206-170
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letter The role of microRNA-1 and microRNA-133 in skeletal muscle proliferation and differentiation
Jian-Fu Chen, Elizabeth M Mandel, J Michael Thomson, Qiulian Wu, Thomas E Callis, Scott M Hammond, Frank L Conlon and Da-Zhi Wang Nature Genetics38, 228–233
(February 2006); doi:10.1038/ng1725
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article Role of p21-activated kinase pathway defects in the cognitive deficits of Alzheimer disease
Lixia Zhao, Qiu-Lan Ma, Frédéric Calon, Marni E Harris-White, Fusheng Yang, Giselle P Lim, Takashi Morihara, Oliver J Ubeda, Surendra Ambegaokar, James E Hansen, Richard H Weisbart, Bruce Teter, Sally A Frautschy and Greg M Cole Nature Neuroscience9, 234–242
(February 2006); doi:10.1038/nn1630
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review article The molecular basis for calcium-dependent axon pathfinding
Timothy M. Gomez and James Q. Zheng Nature Reviews Neuroscience7, 115–125
(February 2006); doi:10.1038/nrn1844
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brief communication Derivation of human embryonic stem cells in defined conditions
Tenneille E Ludwig, Mark E Levenstein, Jeffrey M Jones, W Travis Berggren, Erika R Mitchen, Jennifer L Frane, Leann J Crandall, Christine A Daigh, Kevin R Conard, Marian S Piekarczyk, Rachel A Llanas and James A Thomson Nature Biotechnology24, 185–187
(February 2006); doi:10.1038/nbt1177
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review article Antibody targeted drugs as cancer therapeutics
David Schrama, Ralph A. Reisfeld and Jürgen C. Becker Nature Reviews Drug Discovery5, 147–159
(February 2006); doi:10.1038/nrd1957
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article Restoring function in exhausted CD8 T cells during chronic viral infection
Daniel L. Barber, E. John Wherry, David Masopust, Baogong Zhu, James P. Allison, Arlene H. Sharpe, Gordon J. Freeman and Rafi Ahmed Nature439, 682–687
(09 February 2006); doi:10.1038/nature04444
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news and views Immunology: Exhausted T cells perk up
Matthew A. Williams and Michael J. Bevan Nature439, 669–670
(09 February 2006); doi:10.1038/439669a
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article Structural mechanism of plant aquaporin gating
Susanna Törnroth-Horsefield, Yi Wang, Kristina Hedfalk, Urban Johanson, Maria Karlsson, Emad Tajkhorshid, Richard Neutze and Per Kjellbom Nature439, 688–694
(09 February 2006); doi:10.1038/nature04316
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letter Whole-cell patch-clamp measurements of spermatozoa reveal an alkaline-activated Ca2+ channel
Yuriy Kirichok, Betsy Navarro and David E. Clapham Nature439, 737–740
(09 February 2006); doi:10.1038/nature04417
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letter Antiviral treatment is more effective than smallpox vaccination upon lethal monkeypox virus infection
Koert J. Stittelaar, Johan Neyts, Lieve Naesens, Geert van Amerongen, Rob F. van Lavieren, Antonin Holý, Erik De Clercq, Hubert G. M. Niesters, Edwin Fries, Chantal Maas, Paul G. H. Mulder, Ben A. M. van der Zeijst and Albert D. M. E. Osterhaus Nature439, 745–748
(09 February 2006); doi:10.1038/nature04295
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letter ClpS is an essential component of the N-end rule pathway in Escherichia coli
A. Erbse, R. Schmidt, T. Bornemann, J. Schneider-Mergener, A. Mogk, R. Zahn, D. A. Dougan and B. Bukau Nature439, 753–756
(09 February 2006); doi:10.1038/nature04412
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letter The HIV-1 Vpr and glucocorticoid receptor complex is a gain-of-function interaction that prevents the nuclear localization of PARP-1
Karuppiah Muthumani, Andrew Y. Choo, Wei-Xing Zong, Muniswamy Madesh, Daniel S. Hwang, Arumugam Premkumar, Khanh P. Thieu, Joann Emmanuel, Sanjeev Kumar, Craig B. Thompson and David B. Weiner Nature Cell Biology8, 170–179
(February 2006); doi:10.1038/ncb1352
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review article Developmental apoptosis in C. elegans: a complex CEDnario
Guillaume Lettre and Michael O. Hengartner Nature Reviews Molecular Cell Biology7, 97–108
(February 2006); doi:10.1038/nrm1836
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article Systemic activation of dendritic cells by Toll-like receptor ligands or malaria infection impairs cross-presentation and antiviral immunity
Nicholas S Wilson, Georg M N Behrens, Rachel J Lundie, Christopher M Smith, Jason Waithman, Louise Young, Simon P Forehan, Adele Mount, Raymond J Steptoe, Ken D Shortman, Tania F de Koning-Ward, Gabrielle T Belz, Francis R Carbone, Brendan S Crabb, William R Heath and Jose A Villadangos Nature Immunology7, 165–172
(February 2006); doi:10.1038/ni1300
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news and views Youth has its privileges: maturation inhibits DC cross-priming
Heather D Hickman-Miller and Jonathan W Yewdell Nature Immunology7, 125–126
(February 2006); doi:10.1038/ni0206-125
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review article Journey through the thymus: stromal guides for T-cell development and selection
Yousuke Takahama Nature Reviews Immunology6, 127–135
(February 2006); doi:10.1038/nri1781
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letter Angiopoietin-2 sensitizes endothelial cells to TNF-α and has a crucial role in the induction of inflammation
Ulrike Fiedler, Yvonne Reiss, Marion Scharpfenecker, Verena Grunow, Stefanie Koidl, Gavin Thurston, Nicholas W Gale, Martin Witzenrath, Simone Rosseau, Norbert Suttorp, Astrid Sobke, Matthias Herrmann, Klaus T Preissner, Peter Vajkoczy and Hellmut G Augustin Nature Medicine12, 235–239
(March 2006); doi:10.1038/nm1351
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news and views Angiogenesis and inflammation face off
Beat A Imhof and Michel Aurrand-Lions Nature Medicine12, 171–172
(February 2006); doi:10.1038/nm0206-171
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article Alpha-fetoprotein protects the developing female mouse brain from masculinization and defeminization by estrogens
Julie Bakker, Christelle De Mees, Quentin Douhard, Jacques Balthazart, Philippe Gabant, Josiane Szpirer and Claude Szpirer Nature Neuroscience9, 220–226
(February 2006); doi:10.1038/nn1624
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news and views Defending the brain from estrogen
David A Puts, Cynthia L Jordan and S Marc Breedlove Nature Neuroscience9, 155–156
(February 2006); doi:10.1038/nn0206-155
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review article Notch signalling in vertebrate neural development
Angeliki Louvi and Spyros Artavanis-Tsakonas Nature Reviews Neuroscience7, 93–102
(February 2006); doi:10.1038/nrn1847
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protocol Protein-protein interaction assays: eliminating false positive interactions
Tuan N Nguyen and James A Goodrich Nature Methods3, 135–139
(February 2006); doi:10.1038/nmeth0206-135
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article Replication fork reactivation downstream of a blocked nascent leading strand
Ryan C. Heller and Kenneth J. Marians Nature439, 557–562
(02 February 2006); doi:10.1038/nature04329
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letter GABA regulates synaptic integration of newly generated neurons in the adult brain
Shaoyu Ge, Eyleen L. K. Goh, Kurt A. Sailor, Yasuji Kitabatake, Guo-li Ming and Hongjun Song Nature439, 589–593
(02 February 2006); doi:10.1038/nature04404
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letter Lgl, Pins and aPKC regulate neuroblast self-renewal versus differentiation
Cheng-Yu Lee, Kristin J. Robinson and Chris Q. Doe Nature439, 594–598
(02 February 2006); doi:10.1038/nature04299
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letter Stem cell engraftment at the endosteal niche is specified by the calcium-sensing receptor
Gregor B. Adams, Karissa T. Chabner, Ian R. Alley, Douglas P. Olson, Zbigniew M. Szczepiorkowski , Mark C. Poznansky, Claudine H. Kos, Martin R. Pollak, Edward M. Brown and David T. Scadden Nature439, 599–603
(02 February 2006); doi:10.1038/nature04247
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letter Functional genomics reveals genes involved in protein secretion and Golgi organization
Frederic Bard, Laetitia Casano, Arrate Mallabiabarrena, Erin Wallace, Kota Saito, Hitoshi Kitayama, Gianni Guizzunti, Yue Hu, Franz Wendler, Ramanuj DasGupta, Norbert Perrimon and Vivek Malhotra Nature439, 604–607
(02 February 2006); doi:10.1038/nature04377
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letter Structure of the cyclic-AMP-responsive exchange factor Epac2 in its auto-inhibited state
Holger Rehmann, Joost Das, Puck Knipscheer, Alfred Wittinghofer and Johannes L. Bos Nature439, 625–628
(02 February 2006); doi:10.1038/nature04468
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article GCP-WD is a γ-tubulin targeting factor required for centrosomal and chromatin-mediated microtubule nucleation
Jens Lüders, Urvashi K. Patel and Tim Stearns Nature Cell Biology8, 137–147
(February 2006); doi:10.1038/ncb1349
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letter Regulation of ubiquitin-binding proteins by monoubiquitination
Daniela Hoeller, Nicola Crosetto, Blagoy Blagoev, Camilla Raiborg, Ritva Tikkanen, Sebastian Wagner, Katarzyna Kowanetz, Rainer Breitling, Matthias Mann, Harald Stenmark and Ivan Dikic Nature Cell Biology8, 163–169
(February 2006); doi:10.1038/ncb1354
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review article Critical nodes in signalling pathways: insights into insulin action
Cullen M. Taniguchi , Brice Emanuelli and C. Ronald Kahn Nature Reviews Molecular Cell Biology7, 85–96
(February 2006); doi:10.1038/nrm1837
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article Suppressor of cytokine signaling 1 negatively regulates Toll-like receptor signaling by mediating Mal degradation
Ashley Mansell, Rosealee Smith, Sarah L Doyle, Pearl Gray, Jennifer E Fenner, Peter J Crack, Sandra E Nicholson, Douglas J Hilton, Luke A J O'Neill and Paul J Hertzog Nature Immunology7, 148–155
(February 2006); doi:10.1038/ni1299
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news and views Mal-function of TLRs by SOCS
Takashi Kobayashi, Giichi Takaesu and Akihiko Yoshimura Nature Immunology7, 123–124
(February 2006); doi:10.1038/ni0206-123
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review article Epigenetic gene silencing in cancer - a mechanism for early oncogenic pathway addiction?
Stephen B. Baylin and Joyce E. Ohm Nature Reviews Cancer6, 107–116
(February 2006); doi:10.1038/nrc1799
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article Cooperative and antagonistic interactions between Sall4 and Tbx5 pattern the mouse limb and heart
Kazuko Koshiba-Takeuchi, Jun K Takeuchi, Eric P Arruda, Irfan S Kathiriya, Rong Mo, Chi-chung Hui, Deepak Srivastava and Benoit G Bruneau Nature Genetics38, 175–183
(February 2006); doi:10.1038/ng1707
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review article Literature mining for the biologist: from information retrieval to biological discovery
Lars Juhl Jensen, Jasmin Saric and Peer Bork Nature Reviews Genetics7, 119–129
(February 2006); doi:10.1038/nrg1768
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article The Runx1/AML1 transcription factor selectively regulates development and survival of TrkA nociceptive sensory neurons
Frèdèric Marmigére, Andreas Montelius, Michael Wegner, Yoram Groner, Louis F Reichardt and Patrik Ernfors Nature Neuroscience9, 180–187
(February 2006); doi:10.1038/nn1631
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news and views Specifying nociceptors
Annette Markus Nature Neuroscience9, 162
(February 2006); doi:10.1038/nn0206-162
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article A versatile tool for conditional gene expression and knockdown
Jolanta Szulc, Maciej Wiznerowicz, Marc-Olivier Sauvain, Didier Trono and Patrick Aebischer Nature Methods3, 109–116
(February 2006); doi:10.1038/nmeth846
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article MAPKAPK-2-mediated LIM-kinase activation is critical for VEGF-induced actin remodeling and cell migration
Miho Kobayashi, Michiru Nishita, Toshiaki Mishima, Kazumasa Ohashi and Kensaku Mizuno The EMBO Journal advance online publication
(2 February 2006); doi:10.1038/sj.emboj.7600973
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