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Research library: Apoptosis

2005: December | November | October | September | August | July | June | May | April | March | February | January

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news and views
Apoptosis: eating sensibly
Christopher D. Gregory and Simon B. Brown
Nature Cell Biology 7, 1161–1163
(December 2005); doi:10.1038/ncb1205-1061
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article
A promiscuous liaison between IL-15 receptor and Axl receptor tyrosine kinase in cell death control
Vadim Budagian, Elena Bulanova, Zane Orinska, Lutz Thon, Uwe Mamat1, Paola Bellosta, Claudio Basilico, Dieter Adam, Ralf Paus and Silvia Bulfone-Paus
The EMBO Journal 24, 4260–4270
(December 2005); doi:10.1038/sj.emboj.7600874
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article
The peptidyl-prolyl isomerase Pin1 regulates the stability of granulocyte-macrophage colony-stimulating factor mRNA in activated eosinophils
Zhong-Jian Shen, Stephane Esnault and James S Malter
Nature Immunology 6, 1280–1287
(December 2005); doi:10.1038/ni1266
| Abstract | Full Text (HTML/PDF) |

news and views
Pin1: a proline isomerase that makes you wheeze?
Paul Anderson
Nature Immunology 6, 1211–1212
(December 2005); doi:10.1038/ni1205-1211
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review article
Lysosomes and autophagy in cell death control
Guido Kroemer and Marja Jäättelä
Nature Reviews Cancer 5, 886–897
(November 2005); doi:10.1038/nrc1738
| Summary | Full Text (HTML / PDF) |

news and views
Autophagy: to die or not to die
Myrto Raftopoulou
Nature Cell Biology 7, 1056
(November 2005); doi:10.1038/ncb1105-1056
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article
Regulation of lung injury and repair by Toll-like receptors and hyaluronan
Dianhua Jiang, Jiurong Liang, Juan Fan, Shuang Yu, Suping Chen, Yi Luo, Glenn D Prestwich, Marcella M Mascarenhas, Hari G Garg, Deborah A Quinn, Robert J Homer, Daniel R Goldstein, Richard Bucala, Patty J Lee, Ruslan Medzhitov and Paul W Noble
Nature Medicine 11, 1173–1179
(November 2005); doi:10.1038/nm1315
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news and views
TLRs play good cop, bad cop in the lung
Luke A J O'Neill
Nature Medicine 11, 1161–1162
(November 2005); doi:10.1038/nm1105-1161
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review article
Promoting apoptosis as a strategy for cancer drug discovery
Stephen W. Fesik
Nature Reviews Cancer 5, 876–885
(November 2005); doi:10.1038/nrc1736
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article
CCL5-CCR5 interaction provides antiapoptotic signals for macrophage survival during viral infection
Jeffrey W Tyner, Osamu Uchida, Naohiro Kajiwara, Edy Y Kim, Anand C Patel, Mary P O'Sullivan, Michael J Walter, Reto A Schwendener, Donald N Cook, Theodore M Danoff and Michael J Holtzman
Nature Medicine 11, 1080–1087
(November 2005); doi:10.1038/nm1303
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news and views
Cell biology: A BID for the pathway
Michael B. Kastan
Nature 437, 1103
(20 October 2005); doi:10.1038/4371103a
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article
Apoptosis induced by vitamin A signaling is crucial for connecting the ureters to the bladder
Ekatherina Batourina, Sheaumei Tsai, Sarah Lambert, Preston Sprenkle, Renata Viana, Sonia Dutta, Terry Hensle, Fengwei Wang, Karen Niederreither, Andrew P McMahon, Thomas J Carroll and Cathy L Mendelsohn
Nature Genetics 37, 1082–1089
(October 2005); doi:10.1038/ng1645
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article
Structure of the CED-4-CED-9 complex provides insights into programmed cell death in Caenorhabditis elegans
Nieng Yan, Jijie Chai, Eui Seung Lee, Lichuan Gu, Qun Liu, Jiaqing He, Jia-Wei Wu, David Kokel, Huilin Li, Quan Hao, Ding Xue and Yigong Shi
Nature 437, 831–837
(06 October 2005); doi:10.1038/nature04002
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letter
The endoplasmic reticulum gateway to apoptosis by Bcl-XL modulation of the InsP3R
Carl White, Chi Li, Jun Yang, Nataliya B. Petrenko, Muniswamy Madesh, Craig B. Thompson and J. Kevin Foskett
Nature Cell Biology 7, 1021–1028
(October 2005); doi:10.1038/ncb1302
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article
Caspase-specific and nonspecific in vivo protein processing during Fas-induced apoptosis
Petra Van Damme, Lennart Martens, Jozef Van Damme, Koen Hugelier, An Staes, Joël Vandekerckhove and Kris Gevaert
Nature Methods 2, 771–777
(October 2005); doi:10.1038/nmeth792
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letter
Accelerated ageing in mice deficient in Zmpste24 protease is linked to p53 signalling activation
Ignacio Varela, Juan Cadiñanos, Alberto M. Pendás, Ana Gutiérrez-Fernández, Alicia R. Folgueras, Luis M. Sánchez, Zhongjun Zhou, Francisco J. Rodríguez, Colin L. Stewart, José A Vega, Karl Tryggvason, José M. P. Freije and Carlos López-Otín
Nature 437, 564–568
(22 September 2005); doi:10.1038/nature04019
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letter
Clusterin inhibits apoptosis by interacting with activated Bax
Honglai Zhang, Jin Koo Kim, Chris A. Edwards, Zhaohui Xu, Russell Taichman and Cun-Yu Wang
Nature Cell Biology 7, 909–915
(September 2005); doi:10.1038/ncb1291
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letter
WNT7b mediates macrophage-induced programmed cell death in patterning of the vasculature
Ivan B. Lobov, Sujata Rao, Thomas J. Carroll, Jefferson E. Vallance, Masataka Ito, Jennifer K. Ondr, Savita Kurup, Donald A. Glass, Millan S. Patel, Weiguo Shu, Edward E. Morrisey, Andrew P. McMahon, Gerard Karsenty and Richard A. Lang
Nature 437, 417–421
(15 September 2005); doi:10.1038/nature03928
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review article
Interleukin-21: a modulator of lymphoid proliferation, apoptosis and differentiation
Warren J. Leonard and Rosanne Spolski
Nature Reviews Immunology 5, 688–698
(September 2005); doi:10.1038/nri1688
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article
Bag1 is essential for differentiation and survival of hematopoietic and neuronal cells
Rudolf Götz, Stefan Wiese, Shinichi Takayama, Guadalupe C Camarero, Wilfried Rossoll, Ulrich Schweizer, Jakob Troppmair, Sibylle Jablonka, Bettina Holtmann, John C Reed, Ulf R Rapp and Michael Sendtner
Nature Neuroscience 8, 1169–1178
(September 2005); doi:10.1038/nn1524
| Abstract | Full Text (HTML/PDF) |

review article
Trashing the genome: the role of nucleases during apoptosis
Kumiko Samejima and William C. Earnshaw
Nature Reviews Molecular Cell Biology 6, 677–688
(September 2005); doi:10.1038/nrm1715
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article
Membrane phosphatidylserine distribution as a non-apoptotic signalling mechanism in lymphocytes
James I. Elliott, Annmarie Surprenant, Federica M. Marelli-Berg, Joanne C. Cooper, Robin L. Cassady-Cain, Carol Wooding, Kenneth Linton, Denis R. Alexander and Christopher F. Higgins
Nature Cell Biology 7, 808–816
(August 2005); doi:10.1038/ncb1279
| Abstract | Full Text (HTML/PDF) |

letter
Intracellular protein therapy with SOCS3 inhibits inflammation and apoptosis
Daewoong Jo, Danya Liu, Shan Yao, Robert D Collins and Jacek Hawiger
Nature Medicine 11, 892–898
(August 2005); doi:10.1038/nm1269
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article
Evasion of the p53 tumour surveillance network by tumour-derived MYC mutants
Michael T. Hemann, Anka Bric, Julie Teruya-Feldstein, Andreas Herbst, Jonas A. Nilsson, Carlos Cordon-Cardo, John L. Cleveland, William P. Tansey and Scott W. Lowe
Nature 436, 807–811
(11 August 2005); doi:10.1038/nature03845
| Abstract | Full Text (HTML / PDF) |

news and views
Cancer: Two in one
Anton Berns
Nature 436, 787–789
(11 August 2005); doi:10.1038/436787a
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review article
Regulation of immune responses by L-arginine metabolism
Vincenzo Bronte and Paola Zanovello
Nature Reviews Immunology 5, 641–654
(August 2005); doi:10.1038/nri1668
| Abstract | Full Text (HTML / PDF) |

review article
Telomeres and human disease: ageing, cancer and beyond
Maria A. Blasco
Nature Reviews Genetics 6, 611–622
(August 2005); doi:10.1038/nrg1656
| Abstract | Full Text (HTML / PDF) |

article
Oncogene-induced senescence as an initial barrier in lymphoma development
Melanie Braig, Soyoung Lee, Christoph Loddenkemper, Cornelia Rudolph, Antoine H.F.M. Peters, Brigitte Schlegelberger, Harald Stein, Bernd Dörken, Thomas Jenuwein and Clemens A. Schmitt
Nature 436, 660–665
(04 August 2005); doi:10.1038/nature03841
| Abstract | Full Text (HTML / PDF) |

letter
Crucial role of p53-dependent cellular senescence in suppression of Pten-deficient tumorigenesis
Zhenbang Chen, Lloyd C. Trotman, David Shaffer, Hui-Kuan Lin, Zohar A. Dotan, Masaru Niki, Jason A. Koutcher, Howard I. Scher, Thomas Ludwig, William Gerald, Carlos Cordon-Cardo and Pier Paolo Pandolfi
Nature 436, 725–730
(04 August 2005); doi:10.1038/nature03918
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letter
BRAFE600-associated senescence-like cell cycle arrest of human naevi
Chrysiis Michaloglou, Liesbeth C. W. Vredeveld, Maria S. Soengas, Christophe Denoyelle, Thomas Kuilman, Chantal M. A. M. van der Horst, Donné M. Majoor, Jerry W. Shay, Wolter J. Mooi and Daniel S. Peeper
Nature 436, 720–724
(04 August 2005); doi:10.1038/nature03890
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brief communications
Tumour biology: Senescence in premalignant tumours
Manuel Collado, Jesús Gil, Alejo Efeyan, Carmen Guerra, Alberto J. Schuhmacher, Marta Barradas, Alberto Benguría, Angel Zaballos, Juana M. Flores, Mariano Barbacid, David Beach and Manuel Serrano
Nature 436, 642
(04 August 2005); doi:10.1038/436642a
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news and views
Cancer: Crime and punishment
Norman E. Sharpless and Ronald A. DePinho
Nature 436, 636–637
(04 August 2005); doi:10.1038/436636a
| Full Text (HTML / PDF) |

article
S-nitrosylated GAPDH initiates apoptotic cell death by nuclear translocation following Siah1 binding
Makoto R. Hara, Nishant Agrawal, Sangwon F. Kim, Matthew B. Cascio, Masahiro Fujimuro, Yuji Ozeki, Masaaki Takahashi, Jaime H. Cheah, Stephanie K. Tankou, Lynda D. Hester, Christopher D. Ferris, S. Diane Hayward, Solomon H. Snyder and Akira Sawa
Nature Cell Biology 7, 665–674
(July 2005); doi:10.1038/ncb1268
| Abstract | Full Text (HTML/PDF) |

news and views
A central role for S-nitrosylation in apoptosis
Moran Benhar and Jonathan S. Stamler
Nature Cell Biology 7, 645–646
(July 2005); doi:10.1038/ncb0705-645
| Full Text (HTML/PDF) |

review article
Caspase-independent cell death
Guido Kroemer and Seamus J Martin
Nature Medicine 11, 725–730
(July 2005); doi:10.1038/nm1263
| Abstract | Full Text (HTML/PDF) |

letter
Ephrin signalling controls brain size by regulating apoptosis of neural progenitors
Vanessa Depaepe, Nathalie Suarez-Gonzalez, Audrey Dufour, Lara Passante, Jessica A Gorski, Kevin R. Jones, Catherine Ledent and Pierre Vanderhaeghen
Nature 435, 1244–1250
(30 June 2005); doi:10.1038/nature03651
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letter
Inflammatory arthritis requires Foxo3a to prevent Fas ligand-induced neutrophil apoptosis
Helena Jonsson, Paul Allen and Stanford L Peng
Nature Medicine 11, 666–671
(June 2005); doi:10.1038/nm1248
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news and views
A fork in the pathway to inflammation and arthritis
Foo Y Liew and Iain B McInnes
Nature Medicine 11, 601–602
(June 2005); doi:10.1038/nm0605-601
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letter
An inhibitor of Bcl-2 family proteins induces regression of solid tumours
Tilman Oltersdorf , Steven W. Elmore , Alexander R. Shoemaker , Robert C. Armstrong , David J. Augeri , Barbara A. Belli , Milan Bruncko , Thomas L. Deckwerth , Jurgen Dinges , Philip J. Hajduk , Mary K. Joseph , Shinichi Kitada , Stanley J. Korsmeyer , Aaron R. Kunzer , Anthony Letai , Chi Li , Michael J. Mitten , David G. Nettesheim , ShiChung Ng , Paul M. Nimmer , Jacqueline M. O'Connor , Anatol Oleksijew , Andrew M. Petros , John C. Reed , Wang Shen , Stephen K. Tahir , Craig B. Thompson , Kevin J. Tomaselli , Baole Wang , Michael D. Wendt , Haichao Zhang , Stephen W. Fesik and Saul H. Rosenberg
Nature 435, 677–681
(02 June 2005); doi:10.1038/nature03579
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article
Sensitized RNAi screen of human kinases and phosphatases identifies new regulators of apoptosis and chemoresistance
Jeffrey P. MacKeigan, Leon O. Murphy and John Blenis
Nature Cell Biology 7, 591–600
(June 2005); doi:10.1038/ncb1258
| Abstract | Full Text (HTML/PDF) |

review article
Regulators of apoptosis: suitable targets for immune therapy of cancer
Mads Hald Andersen , Jürgen C. Becker and Per thor Straten
Nature Reviews Drug Discovery 4, 399–409
(May 2005); doi:10.1038/nrd1717
| Summary | Full Text (HTML / PDF) |

article
Ceramide upregulation causes pulmonary cell apoptosis and emphysema-like disease in mice
Irina Petrache, Viswanathan Natarajan, Lijie Zhen, Terry R Medler, Amy T Richter, Chung Cho, Walter C Hubbard, Evgeny V Berdyshev and Rubin M Tuder
Nature Medicine 11, 491–498
(June 2005); doi:10.1038/nm1238
| Abstract | Full Text (HTML/PDF) |

news and views
Lipid let loose in pulmonary emphysema
Jack A Elias and Chun Geun Lee
Nature Medicine 11, 471–472
(May 2005); doi:10.1038/nm0505-471
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letters to nature
Peak SIV replication in resting memory CD4+ T cells depletes gut lamina propria CD4+ T cells
Qingsheng Li, Lijie Duan, Jacob D.Estes, Zhong-Min Ma, Tracy Rourke, Yichuan Wang, Cavan Reilly, John Carlis, Christopher J.Miller and Ashley T.Haase
Nature 434, 1148–1152
(28 April 2005); doi:10.1038/nature03513
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review article
Nuclear factor-κB inhibitors as sensitizers to anticancer drugs
Chikashi Nakanishi and Masakazu Toi
Nature Reviews Cancer 5, 297–309
(April 2005); doi:10.1038/nrc1588
| Summary | Full Text (HTML / PDF) |

review article
Translational control in stress and apoptosis
Martin Holcik and Nahum Sonenberg
Nature Reviews Molecular Cell Biology 6, 318–327
(April 2005); doi:10.1038/nrm1618
| Summary | Full Text (HTML / PDF) |

letters to nature
Structure of the apoptotic protease-activating factor 1 bound to ADP
Stefan J. Riedl, Wenyu Li, Yang Chao, Robert Schwarzenbacher and Yigong Shi
Nature 434, 926–933
(14 April 2005); doi:10.1038/nature03465
| First Paragraph | Full Text (HTML / PDF) |

letter
Stat3-induced apoptosis requires a molecular switch in PI(3)K subunit composition
Kathrine Abell, Antonio Bilancio, Richard W. E. Clarkson, Paul G. Tiffen, Anton I. Altaparmakov, Thomas G. Burdon, Tomoichiro Asano, Bart Vanhaesebroeck and Christine J. Watson
Nature Cell Biology 7, 392–398
(April 2005); doi:10.1038/ncb1242
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letters to nature
Ipr1 gene mediates innate immunity to tuberculosis
Hui Pan, Bo-Shiun Yan, Mauricio Rojas , Yuriy V. Shebzukhov, Hongwei Zhou, Lester Kobzik, Darren E. Higgins, Mark J. Daly, Barry R. Bloom and Igor Kramnik
Nature 434, 767–772
(07 April 2005); doi:10.1038/nature03419
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news and views
Tuberculosis: The genetics of vulnerability
Nada Jabado and Philippe Gros
Nature 434, 709–711
(07 April 2005); doi:10.1038/434709a
| Full Text (HTML / PDF) |

review article
IAPs, RINGs and ubiquitylation
David L. Vaux and John Silke
Nature Reviews Molecular Cell Biology 6, 287–297
(April 2005); doi:10.1038/nrm1621
| Summary | Full Text (HTML / PDF) |

letters to nature
Cyclophilin D-dependent mitochondrial permeability transition regulates some necrotic but not apoptotic cell death
Takashi Nakagawa , Shigeomi Shimizu, Tetsuya Watanabe, Osamu Yamaguchi, Kinya Otsu, Hirotaka Yamagata, Hidenori Inohara, Takeshi Kubo and Yoshihide Tsujimoto
Nature 434, 652–658
(31 March 2005); doi:10.1038/nature03317
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letters to nature
Loss of cyclophilin D reveals a critical role for mitochondrial permeability transition in cell death
Christopher P. Baines, Robert A. Kaiser, Nicole H. Purcell, N. Scott Blair, Hanna Osinska, Michael A. Hambleton, Eric W. Brunskill, M. Richard Sayen, Roberta A. Gottlieb, Gerald W. Dorn II, Jeffrey Robbins and Jeffery D. Molkentin
Nature 434, 658–662
(31 March 2005); doi:10.1038/nature03434
| First Paragraph | Full Text (HTML / PDF) |

article
Soluble CPG15 expressed during early development rescues cortical progenitors from apoptosis
Ulrich Putz, Corey Harwell and Elly Nedivi
Nature Neuroscience 8, 322–331
(March 2005); doi:10.1038/nn1407
| Abstract | Full Text (HTML/PDF) |

article
Bcr-Abl-mediated suppression of normal hematopoiesis in leukemia
Randall E Burton, Tania A Baker and Robert T Sauer
Oncogene
(AOP 28 February 2005); doi:10.1038/c
| Abstract | Full Text (HTML/PDF) |

letters to nature
CD4+ T-cell help controls CD8+ T-cell memory via TRAIL-mediated activation-induced cell death
Edith M. Janssen, Nathalie M. Droin, Edward E. Lemmens, Michael J. Pinkoski, Steven J. Bensinger, Benjamin D. Ehst, Thomas S. Griffith, Douglas R. Green and Stephen P. Schoenberger
Nature 434, 88–93
(03 March 2005); doi:10.1038/nature03337
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letters to nature
Two pathways converge at CED-10 to mediate actin rearrangement and corpse removal in C. elegans
Jason M. Kinchen , Juan Cabello, Doris Klingele, Kelvin Wong, Richard Feichtinger, Heinke Schnabel, Ralf Schnabel and Michael O. Hengartner
Nature 434, 93–99
(03 March 2005); doi:10.1038/nature03263
| First Paragraph | Full Text (HTML / PDF) |

review article
The role of BH3-only proteins in the immune system
Andreas Strasser
Nature Reviews Immunology 5, 189–200
(March 2005); doi:10.1038/nri1568
| Summary | Full Text (HTML / PDF) |

letters to nature
DRP-1-mediated mitochondrial fragmentation during EGL-1-induced cell death in C. elegans
Ravi Jagasia , Phillip Grote, Benedikt Westermann and Barbara Conradt
Nature 433, 754–760
(17 February 2005); doi:10.1038/nature03316
| First Paragraph | Full Text (HTML / PDF) |

article
The p53QS transactivation-deficient mutant shows stress-specific apoptotic activity and induces embryonic lethality
Thomas M Johnson, Ester M Hammond, Amato Giaccia and Laura D Attardi
Nature Genetics 37, 145–152
(February 2005); doi:10.1038/ng1498
| Abstract | Full Text (HTML/PDF) |

article
Lethal anemia caused by interferon-β produced in mouse embryos carrying undigested DNA
Hideyuki Yoshida, Yasutaka Okabe, Kohki Kawane, Hidehiro Fukuyama and Shigekazu Nagata
Nature Immunology 6, 49–56
(January 2005); doi:10.1038/ni1146
| Abstract | Full Text (HTML/PDF) |

news and views
B-cell lymphoma: suppressing a tumor suppressor
Alexander Dent
Nature Medicine 11, 22
(January 2005); doi:10.1038/nm0105-22
| Full Text (HTML/PDF) |

letter
IAPs are functionally non-equivalent and regulate effector caspases through distinct mechanisms
Tencho Tenev, Anna Zachariou, Rebecca Wilson, Mark Ditzel and Pascal Meier
Nature Cell Biology 7, 70–77
(January 2005); doi:10.1038/ncb1204
| First Paragraph | Full Text (HTML/PDF) |

letter
Inhibitors of histone deacetylases induce tumor-selective apoptosis through activation of the death receptor pathway
Alessandra Insinga, Silvia Monestiroli, Simona Ronzoni, Vania Gelmetti, Francesco Marchesi, Andrea Viale, Lucia Altucci, Clara Nervi, Saverio Minucci and Pier Giuseppe Pelicci
Nature Medicine 11, 71–76
(January 2005); doi:10.1038/nm1160
| First Paragraph | Full Text (HTML/PDF) |

letter
Tumor-selective action of HDAC inhibitors involves TRAIL induction in acute myeloid leukemia cells
Angela Nebbioso, Nicole Clarke, Emilie Voltz, Emmanuelle Germain, Concetta Ambrosino, Paola Bontempo, Rosana Alvarez, Ettore M Schiavone, Felicetto Ferrara, Francesco Bresciani, Alessandro Weisz, Angel R de Lera, Hinrich Gronemeyer and Lucia Altucci
Nature Medicine 11, 77–84
(January 2005); doi:10.1038/nm1161
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news and views
Autoimmunity and apoptosis: refusing to go quietly
Donna L Bratton and Peter M Henson
Nature Medicine 11, 26–27
(January 2005); doi:10.1038/nm0105-26
| Full Text (HTML/PDF) |

article
Signaling by the kinase MINK is essential in the negative selection of autoreactive thymocytes
Nami McCarty, Silke Paust, Koichi Ikizawa, Ippeita Dan, Xiaoyan Li and Harvey Cantor
Nature Immunology 6, 65–72
(January 2005); doi:10.1038/ni1145
| Abstract | Full Text (HTML/PDF) |

news and views
Signaling negative selection: is MINK the missing link?
Ed Palmer
Nature Immunology 6, 9–10
(January 2005); doi:10.1038/ni0105-9
| Full Text (HTML/PDF) |

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