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Research library: Transcription/Chromatin

2006: December | November | October | September | August | July | June | May | April | March | February | January

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article
A new progeroid syndrome reveals that genotoxic stress suppresses the somatotroph axis
Laura J. Niedernhofer, George A. Garinis, Anja Raams, Astrid S. Lalai, Andria Rasile Robinson, Esther Appeldoorn, Hanny Odijk, Roos Oostendorp, Anwaar Ahmad, Wibeke van Leeuwen, Arjan F. Theil, Wim Vermeulen, Gijsbertus T. J. van der Horst, Peter Meinecke, Wim J. Kleijer, Jan Vijg, Nicolaas G. J. Jaspers and Jan H. J. Hoeijmakers
Nature 444, 1038–1043
(21 December 2006); doi:10.1038/nature05456
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letter
Early events in the thymus affect the balance of effector and regulatory T cells
Daniel J. Pennington, Bruno Silva-Santos, Tobias Silberzahn, Mónica Escórcio-Correia, Martin J. Woodward, Scott J. Roberts, Adrian L. Smith, P. Julian Dyson and Adrian C. Hayday
Nature 444, 1073–1077
(21 December 2006); doi:10.1038/nature05368
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letter
Regulation of osteoclast differentiation and function by the CaMK-CREB pathway
Kojiro Sato, Ayako Suematsu, Tomoki Nakashima, Sayaka Takemoto-Kimura, Kazuhiro Aoki, Yasuyuki Morishita, Hiroshi Asahara, Keiichi Ohya, Akira Yamaguchi, Toshiyuki Takai, Tatsuhiko Kodama, Talal A Chatila, Haruhiko Bito & Hiroshi Takayanagi
Nature Medicine 12, 1410–1416
(December 2006); doi:10.1038/nm1515
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letter
A chromatin-mediated mechanism for specification of conditional transcription factor targets
Michael J Buck & Jason D Lieb
Nature Genetics 38, 1446–1451
(December 2006); doi:10.1038/ng1917
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article
Maintenance of colonic homeostasis by distinctive apical TLR9 signalling in intestinal epithelial cells
Jongdae Lee, Ji-Hun Mo, Kyoko Katakura, Irit Alkalay, Adam N. Rucker, Yu-Tsueng Liu, Hyun-Ku Lee, Carol Shen, Gady Cojocaru, Steve Shenouda, Martin Kagnoff, Lars Eckmann, Yinon Ben-Neriah & Eyal Raz
Nature Cell Biology 8, 1327–1336
(December 2006); doi:10.1038/ncb1500
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article
Control of thymocyte development and recombination-activating gene expression by the zinc finger protein Zfp608
Feng Zhang, Lance R Thomas, Eugene M Oltz & Thomas M Aune
Nature Immunology 7, 1309–1316
(December 2006); doi:10.1038/ni1397
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news and views
Fetal thymocyte development: putting a zinc finger on it?
Andrea C Carpenter & Craig H Bassing
Nature Immunology 7, 1285–1286
(December 2006); doi:10.1038/ni1206-1285
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CUL4-DDB1 ubiquitin ligase interacts with multiple WD40-repeat proteins and regulates histone methylation
Leigh Ann Higa, Min Wu, Tao Ye, Ryuji Kobayashi, Hong Sun & Hui Zhang
Nature Cell Biology 8, 1277–1283
(November 2006); doi:10.1038/ncb1490
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brief communication
DMP1 mutations in autosomal recessive hypophosphatemia implicate a bone matrix protein in the regulation of phosphate homeostasis
Bettina Lorenz-Depiereux, Murat Bastepe, Anna Benet-Pagès, Mustapha Amyere, Janine Wagenstaller, Ursula Müller-Barth, Klaus Badenhoop, Stephanie M Kaiser, Roger S Rittmaster, Alan H Shlossberg, José L Olivares, César Loris, Feliciano J Ramos, Francis Glorieux, Miikka Vikkula, Harald Jüppner & Tim M Strom
Nature Genetics 38, 1248–1250
(November 2006); doi:10.1038/ng1868
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Neddylation of a breast cancer-associated protein recruits a class III histone deacetylase that represses NFκB-dependent transcription
Fei Gao, Jinke Cheng, Tong Shi & Edward T. H. Yeh
Nature Chemical Biology 8, 1171–1177
(2006); doi:10.1038/ncb1483
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article
Transcription factors TFE3 and TFEB are critical for CD40 ligand expression and thymus-dependent humoral immunity
Chongmin Huan, Matthew L Kelly, Ryan Steele, Iuliana Shapira, Susan R S Gottesman, Christopher A J Roman
Nature Immunology 7, 1082–1091
(2006); doi:10.1038/ni1378
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news and views
Evidence of off-target effects associated with long dsRNAs in Drosophila melanogaster cell-based assays
Meghana M Kulkarni, Matthew Booker, Serena J Silver, Adam Friedman, Pengyu Hong, Norbert Perrimon & Bernard Mathey-Prevot
Nature Methods 3, 833–838
(2006); doi:10.1038/nmeth935
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article
NR4A orphan nuclear receptors are transcriptional regulators of hepatic glucose metabolism
Liming Pei, Hironori Waki, Bhavapriya Vaitheesvaran, Damien C Wilpitz, Irwin J Kurland & Peter Tontonoz
Nature Medicine 12, 1048–1055
(2006); doi:10.1038/nm1471
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article
Evolution of alternative transcriptional circuits with identical logic
Annie E. Tsong , Brian B. Tuch , Hao Li and Alexander D. Johnson
Nature 443, 415–420
(28 September 2006); doi:10.1038/nature05099
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analysis
JmjC-domain-containing proteins and histone demethylation
Robert J. Klose , Eric M. Kallin and Yi Zhang
Nature Reviews Genetics 7, 715–727
(September 2006); doi:10.1038/nrg1945
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article
NR4A orphan nuclear receptors are transcriptional regulators of hepatic glucose metabolism
Liming Pei, Hironori Waki, Bhavapriya Vaitheesvaran, Damien C Wilpitz, Irwin J Kurland & Peter Tontonoz
Nature Medicine 12, 1048–1055
(2006); doi:10.1038/nm1471
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letter
Loss of the tumor suppressor Vhlh leads to upregulation of Cxcr4 and rapidly progressive glomerulonephritis in mice
Mei Ding, Shiying Cui, Chengjin Li, Serge Jothy, Volker Haase, Brent M Steer, Philip A Marsden, Jeffrey Pippin, Stuart Shankland, Maria Pia Rastaldi, Clemens D Cohen, Matthias Kretzler & Susan E Quaggin
Nature Medicine 12, 1081–1087
(2006); doi:10.1038/nm1460
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news and views
Hypoxia pathway linked to kidney failure
Gregg L Semenza
Nature Medicine 12, 996–997
(2006); doi:10.1038/nm0906-996
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letter
JAK signaling globally counteracts heterochromatic gene silencing
Song Shi, Healani C Calhoun, Fan Xia, Jinghong Li, Long Le & Willis X Li
Nature Genetics 38, 1071–1076
(2006); doi:10.1038/ng1860
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news and views
A Hopscotch-chromatin connection
Aurel Betz & James E Darnell Jr
Nature Genetics 38, 977–979
(2006); doi:10.1038/ng0906-977
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letter
Unravelling the dynamics of RNA degradation by ribonuclease II and its RNA-bound complex
Carlos Frazão, Colin E. McVey, Mónica Amblar, Ana Barbas, Clemens Vonrhein, Cecília M. Arraiano and Maria A. Carrondoe
Nature 443, 110–114
(7 September 2006); doi:10.1038/nature05080
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letter
Interactions between E2F1 and SirT1 regulate apoptotic response to DNA damage
Chuangui Wang, Lihong Chen, Xinghua Hou, Zhenyu Li, Neha Kabra, Yihong Ma, Shino Nemoto, Toren Finkel, Wei Gu, W. Douglas Cress & Jiandong Chen
Nature Cell Biology 8, 1025–1031
(6 August 2006); doi:10.1038/ncb1468
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review
Insulators: exploiting transcriptional and epigenetic mechanisms
Miklos Gaszner and Gary Felsenfeld
Nature Reviews Genetics 7, 703–713
(September 2006); doi:10.1038/nrg1925
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letter
Proteolytic turnover of the Gal4 transcription factor is not required for function in vivo
Kip Nalley, Stephen Albert Johnston and Thomas Kodadek
Nature 442, 1054–1057
(31 August 2006); doi:10.1038/nature05067
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article
RecA acts in trans to allow replication of damaged DNA by DNA polymerase V
Katharina Schlacher, Michael M. Cox, Roger Woodgate and Myron F. Goodman
Nature 442, 883–887
(24 August 2006); doi:10.1038/nature05042
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letter
Probing long-distance regulatory interactions in the Drosophila melanogaster bithorax complex using Dam identification
Fabienne Cléard, Yuri Moshkin, François Karch & Robert K Maeda
Nature Genetics 12, 931–935
(August 2006); doi:10.1038/ng1833
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review
Tracking STAT nuclear traffic
Nancy C. Reich and Ling Liu
Nature Review Immunology 6, 602–612
(10 August 2006); doi:10.1038/nri1885
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article
Auxiliary splice factor U2AF26 and transcription factor Gfi1 cooperate directly in regulating CD45 alternative splicing
Florian Heyd, Gerdy ten Dam & Tarik Möröy
Nature Immunology 7, 859–867
(August 2006); doi:10.1038/ni1361
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article
Foxp1 is an essential transcriptional regulator of B cell development
Hui Hu, Bin Wang, Madhuri Borde, Julie Nardone, Shan Maika, Laura Allred, Philip W Tucker & Anjana Rao
Nature Immunology 7, 819–826
(August 2006); doi:10.1038/ni1358
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news and views
FOXtrot and RAGtime in B cells
Fabio Savarese & Rudolf Grosschedl
Nature Immunology 7, 793–794
(August 2006); doi:10.1038/ni0806-793
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article
A comprehensive library of fluorescent transcriptional reporters for Escherichia coli
Alon Zaslaver, Anat Bren, Michal Ronen, Shalev Itzkovitz, Ilya Kikoin, Seagull Shavit, Wolfram Liebermeister, Michael G Surette & Uri Alon
Nature Methods 3, 623–638
(August 2006); doi:10.1038/nmeth895
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letter
ATM stabilizes DNA double-strand-break complexes during V(D)J recombination
Andrea L. Bredemeyer, Girdhar G. Sharma, Ching-Yu Huang, Beth A. Helmink, Laura M. Walker, Katrina C. Khor, Beth Nuskey, Kathleen E. Sullivan, Tej K. Pandita, Craig H. Bassing and Barry P. Sleckman
Nature 442, 466–470
(27 July 2006); doi:10.1038/nature04866
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letter
Suppression of vascular permeability and inflammation by targeting of the transcription factor c-Jun
Roger G Fahmy, Alla Waldman, Guishui Zhang, Ainslie Mitchell, Nicodemus Tedla, Hong Cai, Carolyn R Geczy, Colin N Chesterman, Michael Perry & Levon M Khachigian
Nature Biotechnology 24, 856–863
(July 2006); doi:10.1038/nbt1225
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letter
Kruppel-like factor 2 regulates thymocyte and T-cell migration
Corey M. Carlson, Bart T. Endrizzi, Jinghai Wu, Xiaojie Ding, Michael A. Weinreich, Elizabeth R. Walsh, Maqsood A. Wani, Jerry B. Lingrel, Kristin A. Hogquist and Stephen C. Jameson
Nature 442, 299–302
(20 July 2006); doi:10.1038/nature04882
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letter
The putative oncogene GASC1 demethylates tri- and dimethylated lysine 9 on histone H3
Paul A. C. Cloos, Jesper Christensen, Karl Agger, Alessio Maiolica, Juri Rappsilber, Torben Antal, Klaus H. Hansen and Kristian Helin
Nature 442, 307–311
(20 July 2006); doi:10.1038/nature04837
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letter
The transcriptional repressor JHDM3A demethylates trimethyl histone H3 lysine 9 and lysine 36
Robert J. Klose, Kenichi Yamane, Yangjin Bae, Dianzheng Zhang, Hediye Erdjument-Bromage, Paul Tempst, Jiemin Wong and Yi Zhang
Nature 442, 312–316
(20 July 2006); doi:10.1038/nature04853
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letter
CpG island methylator phenotype underlies sporadic microsatellite instability and is tightly associated with BRAF mutation in colorectal cancer
Daniel J Weisenberger, Kimberly D Siegmund, Mihaela Campan, Joanne Young, Tiffany I Long, Mark A Faasse, Gyeong Hoon Kang, Martin Widschwendter, Deborah Weener, Daniel Buchanan, Hoey Koh, Lisa Simms, Melissa Barker, Barbara Leggett, Joan Levine, Myungjin Kim, Amy J French, Stephen N Thibodeau, Jeremy Jass, Robert Haile & Peter W Laird
Nature Genetics 7, 787–793
(July 2006); doi:10.1038/ng1834
| Summary | Full Text (HTML / PDF) |

news and views
CIMPle origin for promoter hypermethylation in colorectal cancer?
Kornel Schuebel, Wei Chen & Stephen B Baylin
Nature Genetics 7, 738–740
(July 2006); doi:10.1038/ng0706-738
| Summary | Full Text (HTML / PDF) |

letter
Regulation of RNA-polymerase-II-dependent transcription by N-WASP and its nuclear-binding partners
Xiaoyang Wu, Youngdong Yoo, Nataly N. Okuhama, Philip W. Tucker, Gang Liu & Jun-Lin Guan
Nature Cell Biology 8, 756–753
(11 June 2006); doi:10.1038/ncb1433
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news and views
Actin's latest act: polymerizing to facilitate transcription?
Erwann Vieu & Nouria Hernandez
Nature Cell Biology 8, 650–651
(2006); doi:10.1038/ncb0706-650
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letter
A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling
Joanna Wysocka, Tomek Swigut, Hua Xiao, Thomas A. Milne, So Yeon Kwon, Joe Landry, Monika Kauer, Alan J. Tackett, Brian T. Chait, Paul Badenhorst, Carl Wu and C. David Allis
Nature 442, 86–90
(06 July 2006); doi:10.1038/nature04815
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Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF
Haitao Li, Serge Ilin, Wooikoon Wang, Elizabeth M. Duncan, Joanna Wysocka, C. David Allis and Dinshaw J. Patel
Nature 442, 91–95
(06 July 2006); doi:10.1038/nature04802
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article
Regulation of naive T cell function by the NF-κB2 pathway
Naozumi Ishimaru, Hidehiro Kishimoto, Yoshio Hayashi & Jonathan Sprent
Nature Immunology 7, 763–772
(July 2006); doi:10.1038/ni1351
| Summary | Full Text (HTML / PDF) |

article
AMPA receptors regulate transcription of the plasticity-related immediate-early gene Arc
Vikram R Rao, Sean A Pintchovski, Jeannie Chin, Carol L Peebles, Siddhartha Mitra & Steven Finkbeiner
Nature Neuroscience 7, 887–895
(July 2006); doi:10.1038/nn1708
| Summary | Full Text (HTML / PDF) |

letter
CRD-BP mediates stabilization of ßTrCP1 and c-myc mRNA in response to ß-catenin signalling
Felicite K. Noubissi, Irina Elcheva, Neehar Bhatia, Abbas Shakoori, Andrei Ougolkov, Jianghuai Liu, Toshinari Minamoto, Jeff Ross, Serge Y. Fuchs and Vladimir S. Spiegelman
Nature 441, 898–901
(15 June 2006); doi:10.1038/nature04839
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letter
Dual selection enhances the signaling specificity of a variant of the quorum-sensing transcriptional activator LuxR
Cynthia H Collins, Jared R Leadbetter & Frances H Arnold
Nature Biotechnology 24, 708–712
(June 2006); doi:10.1038/nbt1209
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news and views
A luxRury of synthetic signals
Stephen W Michnick
Nature Biotechnology 24, 658–660
(June 2006); doi:10.1038/nbt0606-658
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article
NFAT dysregulation by increased dosage of DSCR1 and DYRK1A on chromosome 21
Joseph R. Arron, Monte M. Winslow, Alberto Polleri, Ching-Pin Chang, Hai Wu, Xin Gao, Joel R. Neilson, Lei Chen, Jeremy J. Heit, Seung K. Kim, Nobuyuki Yamasaki, Tsuyoshi Miyakawa, Uta Francke, Isabella A. Graef and Gerald R. Crabtree
Nature 441, 595–600
(01 June 2006); doi:10.1038/nature04678
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letter
A genome-wide Drosophila RNAi screen identifies DYRK-family kinases as regulators of NFAT
Yousang Gwack, Sonia Sharma, Julie Nardone, Bogdan Tanasa, Alina Iuga, Sonal Srikanth, Heidi Okamura, Diana Bolton, Stefan Feske, Patrick G. Hogan and Anjana Rao
Nature 441, 646–650
(01 June 2006); doi:10.1038/nature04631
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news and views
Down's syndrome: Critical genes in a critical region
Charles J. Epstein
Nature 441, 582–583
(01 June 2006); doi:10.1038/441582a
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letter
Blimp1 associates with Prmt5 and directs histone arginine methylation in mouse germ cells
Katia Ancelin, Ulrike C. Lange, Petra Hajkova, Robert Schneider, Andrew J. Bannister, Tony Kouzarides & M. Azim Surani
Published online: 14 May 2006
doi:10.1038/ncb1413
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article
Negative regulation of interferon-regulatory factor 3-dependent innate antiviral response by the prolyl isomerase Pin1
Tatsuya Saitoh, Adrian Tun-Kyi, Akihide Ryo, Masahiro Yamamoto, Greg Finn, Takashi Fujita, Shizuo Akira, Naoki Yamamoto, Kun Ping Lu & Shoji Yamaoka
Nature Immunology 7, 598–605
(June 2006); doi:10.1038/ni1347
| Summary | Full Text (HTML / PDF) |

news and views
Pin-ning down immune responses to RNA viruses
Nadege Goutagny, Martina Severa & Katherine A Fitzgerald
Nature Immunology 7, 555–557
(June 2006); doi:10.1038/ni0606-555
| Summary | Full Text (HTML / PDF) |

article
Gene expression changes and molecular pathways mediating activity-dependent plasticity in visual cortex
Daniela Tropea, Gabriel Kreiman, Alvin Lyckman, Sayan Mukherjee, Hongbo Yu, Sam Horng & Mriganka Sur
Nature Neuroscience 9, 660–668
(May 2006); doi:10.1038/nn1689
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article
Synergy of glucose and growth hormone signalling in islet cells through ICA512 and STAT5
Hassan Mziaut, Mirko Trajkovski, Stephan Kersting, Armin Ehninger, Anke Altkrüger, Régis P. Lemaitre, Darja Schmidt, Hans–Detlev Saeger, Myung–Shik Lee, David N. Drechsel, Stefan Müller & Michele Solimena
Nature Cell Biology 8, 435 –445
(May 2006); doi:10.1038/ncb1395
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article
Forkhead protein FoxO1 mediates Agrp–dependent effects of leptin on food intake
Tadahiro Kitamura, Yun Feng, Yukari Ido Kitamura, Streamson C Chua, Allison W Xu, Gregory S Barsh, Luciano Rossetti, Domenico Accili
Nature Medicine 12, 534–540
(May 2006); doi:10.1038/nm1392
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article
Transcriptional repressor Blimp-1 regulates T cell homeostasis and function
Gislâine A Martins, Luisa Cimmino, Miriam Shapiro-Shelef, Matthias Szabolcs, Alan Herron, Erna Magnusdottir & Kathryn Calame
Nature Immunology 7, 457–465
(May 2006) | doi:10.1038/ni1321
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article
Transcriptional repressor Blimp-1 is essential for T cell homeostasis and self-tolerance
Axel Kallies, Edwin D Hawkins, Gabrielle T Belz, Donald Metcalf, Mirja Hommel, Lynn M Corcoran, Philip D Hodgkin & Stephen L Nutt
Nature Immunology 7, 466–474
(May 2006) | doi:10.1038/ni1321
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news and views
T cells join the Blimp-1 brigade
Pamela J Fink
Nature Immunology 7, 445–446
(May 2006) | doi:10.1038/ni0506-445
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review article
Phenotypic variation in bacteria: the role of feedback regulation
Wiep Klaas Smits, Oscar P. Kuipers and Jan-Willem Veening
Nature Reviews Microbiology 4, 259–271
(April 2006); doi:10.1038/nrmicro1381
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news and views
Ageing: Chromatin unbound
Jan Vijg and Yousin Suh
Nature 440, 874–875
(13 April 2006); doi:10.1038/440874a
| Full Text (HTML / PDF) |

article
MyD88-mediated stabilization of interferon-γ-induced cytokine and chemokine mRNA
Dongxu Sun & Aihao Ding
Nature Immunology 7, 375–381
(April 2006); doi:10.1038/ni1308
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news and views
MyD88 beyond Toll
Jiahuai Han
Nature Immunology 7, 370–371
(April 2006); doi:10.1038/ni0406-370
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article
The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells
Yuin-Han Loh, Qiang Wu, Joon-Lin Chew, Vinsensius B Vega, Weiwei Zhang, Xi Chen, Guillaume Bourque, Joshy George, Bernard Leong, Jun Liu, Kee-Yew Wong, Ken W Sung, Charlie W H Lee, Xiao-Dong Zhao, Kuo-Ping Chiu, Leonard Lipovich, Vladimir A Kuznetsov, Paul Robson, Lawrence W Stanton, Chia-Lin Wei, Yijun Ruan, Bing Lim & Huck-Hui Ng
Nature Genetics 38, 431–440
(April 2006); doi:10.1038/ng1760
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letter
Oncogenic activity of Cdc6 through repression of the INK4/ARF locus
Susana Gonzalez, Peter Klatt, Sonia Delgado, Esther Conde, Fernando Lopez-Rios, Montserrat Sanchez-Cespedes, Juan Mendez, Francisco Antequera and Manuel Serrano
Nature 440, 702–706
(30 March 2006); doi:10.1038/nature04585
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letter
The microRNA miR-181 targets the homeobox protein Hox-A11 during mammalian myoblast differentiation
Irina Naguibneva, Maya Ameyar-Zazoua, Anna Polesskaya, Slimane Ait-Si-Ali, Reguina Groisman, Mouloud Souidi, Sylvain Cuvellier & Annick Harel-Bellan
Nature Cell Biology 8, 278–284
(30 March 2006); doi:10.1038/ncb1373
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review article
A visual approach to proteomics
Stephan Nickell, Christine Kofler, Andrew P. Leis and Wolfgang Baumeister
Nature Reviews Molecular Cell Biology 7, 225–230
(30 March 2006); doi:10.1038/nrm1861
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letter
Variant of transcription factor 7-like 2 (TCF7L2) gene confers risk of type 2 diabetes
Struan F A Grant, Gudmar Thorleifsson, Inga Reynisdottir, Rafn Benediktsson, Andrei Manolescu, Jesus Sainz, Agnar Helgason, Hreinn Stefansson, Valur Emilsson, Anna Helgadottir, Unnur Styrkarsdottir, Kristinn P Magnusson, G Bragi Walters, Ebba Palsdottir, Thorbjorg Jonsdottir, Thorunn Gudmundsdottir, Arnaldur Gylfason, Jona Saemundsdottir, Robert L Wilensky, Muredach P Reilly, Daniel J Rader, Yu Bagger, Claus Christiansen, Vilmundur Gudnason, Gunnar Sigurdsson, Unnur Thorsteinsdottir, Jeffrey R Gulcher, Augustine Kong & Kari Stefansson
Nature Genetics 38, 320–323
(March 2006); doi:10.1038/ng1732
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letter
The PerR transcription factor senses H2O2 by metal-catalysed histidine oxidation
Jin-Won Lee and John D. Helmann
Nature 440, 363–367
(16 March 2006); doi:10.1038/nature04537
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article
Feedback repression is required for mammalian circadian clock function
Trey K Sato, Rikuhiro G Yamada, Hideki Ukai, Julie E Baggs, Loren J Miraglia, Tetsuya J Kobayashi, David K Welsh, Steve A Kay, Hiroki R Ueda and John B Hogenesch
Nature Genetics 38, 312–319
(March 2006); doi:10.1038/ng1745
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review article
N6-methyl-adenine: an epigenetic signal for DNA-protein interactions
Didier Wion and Josep Casadesús
Nature Reviews Microbiology 4, 183–192
(March 2006); doi:10.1038/nrmicro1350
| Abstract | Full Text (HTML/PDF) |

letter
Facioscapulohumeral muscular dystrophy in mice overexpressing FRG1
Davide Gabellini, Giuseppe D'Antona, Maurizio Moggio, Alessandro Prelle, Chiara Zecca, Raffaella Adami, Barbara Angeletti, Patrizia Ciscato, Maria Antonietta Pellegrino, Roberto Bottinelli, Michael R. Green and Rossella Tupler
Nature 439, 973–977
(23 February 2006); doi:10.1038/nature04422
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A var gene promoter controls allelic exclusion of virulence genes in Plasmodium falciparum malaria
Till S. Voss, Julie Healer, Allison J. Marty, Michael F. Duffy, Jennifer K. Thompson, James G. Beeson, John C. Reeder, Brendan S. Crabb and Alan F. Cowman
Nature 439, 1004–1008
(23 February 2006); doi:10.1038/nature04407
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article
Histone demethylation by a family of JmjC domain-containing proteins
Yu-ichi Tsukada, Jia Fang, Hediye Erdjument-Bromage, Maria E. Warren, Christoph H. Borchers, Paul Tempst and Yi Zhang
Nature 439, 811–816
(16 February 2006); doi:10.1038/nature04433
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letter
The Polycomb group protein EZH2 directly controls DNA methylation
Emmanuelle Viré, Carmen Brenner, Rachel Deplus, Loïc Blanchon, Mario Fraga, Céline Didelot, Lluis Morey, Aleyde Van Eynde, David Bernard, Jean-Marie Vanderwinden, Mathieu Bollen, Manel Esteller, Luciano Di Croce, Yvan de Launoit and François Fuks
Nature 439, 871–874
(16 February 2006); doi:10.1038/nature04431
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news and views
Developmental biology: Two paths to silence merge
Panthea Taghavi and Maarten van Lohuizen
Nature 439, 794–795
(16 February 2006); doi:10.1038/439794a
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letter
The role of microRNA-1 and microRNA-133 in skeletal muscle proliferation and differentiation
Jian-Fu Chen, Elizabeth M Mandel, J Michael Thomson, Qiulian Wu, Thomas E Callis, Scott M Hammond, Frank L Conlon and Da-Zhi Wang
Nature Genetics 38, 228–233
(February 2006); doi:10.1038/ng1725
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review article
Epigenetic gene silencing in cancer - a mechanism for early oncogenic pathway addiction?
Stephen B. Baylin and Joyce E. Ohm
Nature Reviews Cancer 6, 107–116
(February 2006); doi:10.1038/nrc1799
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The Runx1/AML1 transcription factor selectively regulates development and survival of TrkA nociceptive sensory neurons
Frèdèric Marmigére, Andreas Montelius, Michael Wegner, Yoram Groner, Louis F Reichardt and Patrik Ernfors
Nature Neuroscience 9, 180–187
(February 2006); doi:10.1038/nn1631
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Specifying nociceptors
Annette Markus
Nature Neuroscience 9, 162
(February 2006); doi:10.1038/nn0206-162
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Chromatin organization and cell fate switch respond to positional information in Arabidopsis
Silvia Costa and Peter Shaw
Nature 439, 493–496
(26 January 2006); doi:10.1038/nature04269
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article
TFE3 transcriptionally activates hepatic IRS-2, participates in insulin signaling and ameliorates diabetes
Yoshimi Nakagawa, Hitoshi Shimano, Tomohiro Yoshikawa, Tomohiro Ide, Mariko Tamura, Mika Furusawa, Takashi Yamamoto, Noriyuki Inoue, Takashi Matsuzaka, Akimitsu Takahashi, Alyssa H Hasty, Hiroaki Suzuki, Hirohito Sone, Hideo Toyoshima, Naoya Yahagi and Nobuhiro Yamada
Nature Medicine 12, 107–113
(January 2006); doi:10.1038/nm1334
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review article
KLF4, p21 and context-dependent opposing forces in cancer
Benjamin D. Rowland and Daniel S. Peeper
Nature Reviews Cancer 6, 11–23
(January 2006); doi:10.1038/nrc1780
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article
Structure of an RNA polymerase II-RNA inhibitor complex elucidates transcription regulation by noncoding RNAs
Hubert Kettenberger, Alexander Eisenführ, Florian Brueckner, Mirko Theis, Michael Famulok and Patrick Cramer
Nature Structural and Molecular Biology 13, 44–48
(January 2006); doi:10.1038/nsmb1032
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A SAGA of proteasomal ATPases
Sowmya Swaminathan
Nature Cell Biology 8, 13
(January 2006); doi:10.1038/ncb0106-13
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review article
A PANorama of PAX genes in cancer and development
Ewan J. D. Robson, Shu-Jie He and Michael R. Eccles
Nature Reviews Cancer 6, 52–62
(January 2006); doi:10.1038/nrc1778
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article
Lymphoid cell growth and transformation are suppressed by a key regulatory element of the gene encoding PU.1
Frank Rosenbauer, Bronwyn M Owens, Li Yu, Joseph R Tumang, Ulrich Steidl, Jeffery L Kutok, Linda K Clayton, Katharina Wagner, Marina Scheller, Hiromi Iwasaki, Chunhui Liu, Björn Hackanson, Koichi Akashi, Achim Leutz, Thomas L Rothstein, Christoph Plass and Daniel G Tenen
Nature Genetics 38, 27–37
(January 2006); doi:10.1038/ng1679
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article
A single-molecule method for the quantitation of microRNA gene expression
Lori A Neely, Sonal Patel, Joanne Garver, Michael Gallo, Maria Hackett, Stephen McLaughlin, Mark Nadel, John Harris, Steve Gullans and Jenny Rooke
Nature Methods 3, 41–46
(January 2006); doi:10.1038/nmeth825
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RNA translocation and unwinding mechanism of HCV NS3 helicase and its coordination by ATP
Sophie Dumont, Wei Cheng, Victor Serebrov, Rudolf K. Beran, Ignacio Tinoco Jr, Anna Marie Pyle and Carlos Bustamante
Nature 439, 105–108
(05 January 2006); doi:10.1038/nature04331
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article
The human SWI/SNF subunit Brm is a regulator of alternative splicing
Eric Batsché, Moshe Yaniv and Christian Muchardt
Nature Structural and Molecular Biology 13, 22–29
(January 2006); doi:10.1038/nsmb1030
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Chromatin, transcript elongation and alternative splicing
Alberto R Kornblihtt
Nature Structural and Molecular Biology 13, 5–7
(January 2006); doi:10.1038/nsmb0106-5
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